Chierici, Marco

Chierici, Marco  

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A comprehensive assessment of RNA-Seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium 1-gen-2014 Zhenqiang, Su; Paweł P., Łabaj; Sheng, Li; Jean Thierry, Mieg; Danielle Thierry, Mieg; Wei, Shi; Charles, Wang; Gary P., Schroth; Robert A., Setterquist; John F., Thompson; Wendell D., Jones; Wenzhong, Xiao; Weihong, Xu; Roderick V., Jensen; Reagan, Kelly; Joshua, Xu; Ana, Conesa; Furlanello, Cesare; Hanlin, Gao; Huixiao, Hong; Nadereh, Jafari; Stan, Letovsky; Yang, Liao; Fei, Lu; Edward J., Oakeley; Zhiyu, Peng; Craig A., Praul; Javier Santoyo, Lopez; Andreas, Scherer; Tieliu, Shi; Gordon K., Smyth; Frank, Staedtler; Peter, Sykacek; Xin Xing, Tan; E., Aubrey Thompson; Jo, Vandesompele; May D., Wang; Jian, Wang; Russell D., Wolfinger; Jiri, Zavadil; Scott S., Auerbach; Wenjun, Bao; Hans, Binder; Thomas, Blomquist; Murray H., Brilliant; Pierre R., Bushel; Weimin, Cai; Jennifer G., Catalano; Ching Wei, Chang; Tao, Chen; Geng, Chen; Rong, Chen; Chierici, Marco; Tzu Ming, Chu; Djork Arné, Clevert; Youping, Deng; Adnan, Derti; Viswanath, Devanarayan; Zirui, Dong; Joaquin, Dopazo; Tingting, Du; Hong, Fang; Yongxiang, Fang; Mario, Fasold; Anita, Fernandez; Matthias, Fischer; Pedro Furió, Tari; James C., Fuscoe; Florian, Caimet; Stan, Gaj; Jorge, Gandara; Huan, Gao; Weigong, Ge; Yoichi, Gondo; Binsheng, Gong; Meihua, Gong; Zhuolin, Gong; Bridgett, Green; Chao, Guo; Lei, Guo; Li Wu, Guo; James, Hadfield; Jan, Hellemans; Sepp, Hochreiter; Meiwen, Jia; Min, Jian; Charles D., Johnson; Suzanne, Kay; Jos, Kleinjans; Samir, Lababidi; Shawn, Levy; Quan Zhen, Li; Li, Li; Li, Li; Peng, Li; Yan, Li; Haiqing, Li; Jianying, Li; Shiyong, Li; Simon M., Lin; Francisco J., López; Xin, Lu; Heng, Luo; Xiwen, Ma; Joseph, Meehan; Dalila B., Megherbi; Nan, Mei; Bing, Mu; Baitang, Ning; Akhilesh, Pandey; Javier Pérez, Florido; Roger G., Perkins; Ryan, Peters; John H., Phan; Mehdi, Pirooznia; Feng, Qian; Tao, Qing; Lucille, Rainbow; Philippe Rocca, Serra; Laure, Sambourg; Susanna Assunta, Sansone; Scott, Schwartz; Ruchir, Shah; Jie, Shen; Todd M., Smith; Oliver, Stegle; Nancy Stralis, Pavese; Elia, Stupka; Yutaka, Suzuki; Lee T., Szkotnicki; Matthew, Tinning; Bimeng, Tu; Joost van, Delft; Alicia Vela, Boza; Elisa, Venturini; Stephen J., Walker; Liqing, Wan; Wei, Wang; Jinhui, Wang; Jun, Wang; Eric D., Wieben; James C., Willey; Po Yen, Wu; Jiekun, Xuan; Yong, Yang; Zhan, Ye; Ye, Yin; Ying, Yu; Yate Ching, Yuan; John, Zhang; Ke K., Zhang; Wenqian, Zhang; Wenwei, Zhang; Yanyan, Zhang; Chen, Zhao; Yuanting, Zheng; Yiming, Zhou; Paul, Zumbo; Weida, Tong; David P., Kreil; Christopher E., Mason; Leming, Shi
A metaproteomic-based gut microbiota profiling in children affected by autism spectrum disorders 1-gen-2022 Levi Mortera, Stefano; Vernocchi, Pamela; Basadonne, Ilaria; Zandonà, Alessandro; Chierici, Marco; Durighello, Martina; Marzano, Valeria; Gardini, Simone; Gasbarrini, Antonio; Urbani, Andrea; Vicari, Stefano; Roncada, Paola; Furlanello, Cesare; Venuti, Paola; Putignani, Lorenza
A Pan-Cancer Approach to Predict Responsiveness to Immune Checkpoint Inhibitors by Machine Learning 1-gen-2019 Polano, Maurizio; Chierici, Marco; Dal Bo, Michele; Gentilini, Davide; Di Cintio, Federica; Baboci, Lorena; Gibbs, David L.; Furlanello, Cesare; Toffoli, Giuseppe
A promoter-level mammalian expression atlas 1-gen-2014 Alistair R. R., Forrest; Hideya, Kawaji; Michael, Rehli; J., Kenneth Baillie; Michiel J. L., de Hoon; Vanja, Haberle; Timo, Lassmann; Ivan V., Kulakovskiy; Marina, Lizio; Masayoshi, Itoh; Robin, Andersson; Christopher J., Mungall; Terrence F., Meehan; Sebastian, Schmeier; Nicolas, Bertin; Mette, Jørgensen; Emmanuel, Dimont; Erik, Arner; Christian, Schmidl; Ulf, Schaefer; Yulia A., Medvedeva; Charles, Plessy; Morana, Vitezic; Jessica, Severin; Colin A., Semple; Yuri, Ishizu; Robert S., Young; Margherita, Francescatto; Intikhab, Alam; Davide, Albanese; Gabriel M., Altschuler; Takahiro, Arakawa; John A. C., Archer; Peter, Arner; Magda, Babina; Sarah, Rennie; Piotr J., Balwierz; Anthony G., Beckhouse; Swati Pradhan, Bhatt; Judith A., Blake; Antje, Blumenthal; Beatrice, Bodega; Alessandro, Bonetti; James, Briggs; Frank, Brombacher; A., Maxwell Burroughs; Andrea, Califano; Carlo V., Cannistraci; Daniel, Carbajo; Yun, Chen; Chierici, Marco; Yari, Ciani; Hans C., Clevers; Emiliano, Dalla; Carrie A., Davis; Michael, Detmar; Alexander D., Diehl; Taeko, Dohi; Finn, Drabløs; Albert S. B., Edge; Matthias, Edinger; Karl, Ekwall; Mitsuhiro, Endoh; Hideki, Enomoto; Michela, Fagiolini; Lynsey, Fairbairn; Hai, Fang; Mary C., Farach Carson; Geoffrey J., Faulkner; Alexander V., Favorov; Malcolm E., Fisher; Martin C., Frith; Rie, Fujita; Shiro, Fukuda; Furlanello, Cesare; Masaaki, Furuno; Jun ichi, Furusawa; Teunis B., Geijtenbeek; Andrew P., Gibson; Thomas, Gingeras; Daniel, Goldowitz; Julian, Gough; Sven, Guhl; Reto, Guler; Stefano, Gustincich; Thomas J., Ha; Masahide, Hamaguchi; Mitsuko, Hara; Matthias, Harbers; Jayson, Harshbarger; Akira, Hasegawa; Yuki, Hasegawa; Takehiro, Hashimoto; Meenhard, Herlyn; Kelly J., Hitchens; Shannan J., Ho Sui; Oliver M., Hofmann; Ilka, Hoof; Fumi, Hori; Lukasz, Huminiecki; Kei, Iida; Tomokatsu, Ikawa; Boris R., Jankovic; Hui, Jia; Anagha, Joshi; Jurman, Giuseppe; Bogumil, Kaczkowski; Chieko, Kai; Kaoru, Kaida; Ai, Kaiho; Kazuhiro, Kajiyama; Mutsumi Kanamori, Katayama; Artem S., Kasianov; Takeya, Kasukawa; Shintaro, Katayama; Sachi, Kato; Shuji, Kawaguchi; Hiroshi, Kawamoto; Yuki I., Kawamura; Tsugumi, Kawashima; Judith S., Kempfle; Tony J., Kenna; Juha, Kere; Levon M., Khachigian; Toshio, Kitamura; S., Peter Klinken; Alan J., Knox; Miki, Kojima; Soichi, Kojima; Naoto, Kondo; Haruhiko, Koseki; Shigeo, Koyasu; Sarah, Krampitz; Atsutaka, Kubosaki; Andrew T., Kwon; Jeroen F. J., Laros; Weonju, Lee; Andreas, Lennartsson; Kang, Li; Berit, Lilje; Leonard, Lipovich; Alan Mackay, Sim; Ri ichiroh, Manabe; Jessica C., Mar; Benoit, Marchand; Anthony, Mathelier; Niklas, Mejhert; Alison, Meynert; Yosuke, Mizuno; David A., de Lima Morais; Hiromasa, Morikawa; Mitsuru, Morimoto; Kazuyo, Moro; Efthymios, Motakis; Hozumi, Motohashi; Christine L., Mummery; Mitsuyoshi, Murata; Sayaka Nagao, Sato; Yutaka, Nakachi; Fumio, Nakahara; Toshiyuki, Nakamura; Yukio, Nakamura; Kenichi, Nakazato; Erik van, Nimwegen; Noriko, Ninomiya; Hiromi, Nishiyori; Shohei, Noma; Tadasuke, Nozaki; Soichi, Ogishima; Naganari, Ohkura; Hiroko, Ohmiya; Hiroshi, Ohno; Mitsuhiro, Ohshima; Mariko Okada, Hatakeyama; Yasushi, Okazaki; Valerio, Orlando; Dmitry A., Ovchinnikov; Arnab, Pain; Robert, Passier; Margaret, Patrikakis; Helena, Persson; Silvano, Piazza; James G. D., Prendergast; Owen J. L., Rackham; Jordan A., Ramilowski; Mamoon, Rashid; Timothy, Ravasi; Patrizia, Rizzu; Marco, Roncador; Sugata, Roy; Morten B., Rye; Eri, Saijyo; Antti, Sajantila; Akiko, Saka; Shimon, Sakaguchi; Mizuho, Sakai; Hiroki, Sato; Hironori, Satoh; Suzana, Savvi; Alka, Saxena; Claudio, Schneider; Erik A., Schultes; Gundula G., Schulze Tanzil; Anita, Schwegmann; Thierry, Sengstag; Guojun, Sheng; Hisashi, Shimoji; Yishai, Shimoni; Jay W., Shin; Christophe, Simon; Daisuke, Sugiyama; Takaaki, Sugiyama; Masanori, Suzuki; Naoko, Suzuki; Rolf K., Swoboda; Peter A. C., ’t Hoen; Michihira, Tagami; Naoko, Takahashi; Jun, Takai; Hiroshi, Tanaka; Hideki, Tatsukawa; Zuotian, Tatum; Mark, Thompson; Hiroo, Toyoda; Tetsuro, Toyoda; Eivind, Valen; Marc van de, Wetering; Linda M., van den Berg; Roberto, Verardo; Dipti, Vijayan; Ilya E., Vorontsov; Wyeth W., Wasserman; Shoko, Watanabe; Christine A., Wells; Louise N., Winteringham; Ernst, Wolvetang; Emily J., Wood; Yoko, Yamaguchi; Masayuki, Yamamoto; Misako, Yoneda; Yohei, Yonekura; Shigehiro, Yoshida; Susan E., Zabierowski; Peter G., Zhang; Xiaobei, Zhao; Silvia, Zucchelli; Kim M., Summers; Harukazu, Suzuki; Carsten O., Daub; Jun, Kawai; Peter, Heutink; Winston, Hide; Tom C., Freeman; Boris, Lenhard; Vladimir B., Bajic; Martin S., Taylor; Vsevolod J., Makeev; Albin, Sandelin; David A., Hume; Piero, Carninci; Yoshihide, Hayashizaki
A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency 1-gen-2021 Jones, Wendell; Gong, Binsheng; Novoradovskaya, Natalia; Li, Dan; Kusko, Rebecca; Richmond, Todd A.; Johann, Donald J.; Bisgin, Halil; Sahraeian, Sayed Mohammad Ebrahim; Bushel, Pierre R.; Pirooznia, Mehdi; Wilkins, Katherine; Chierici, Marco; Bao, Wenjun; Basehore, Lee Scott; Lucas, Anne Bergstrom; Burgess, Daniel; Butler, Daniel J.; Cawley, Simon; Chang, Chia-Jung; Chen, Guangchun; Chen, Tao; Chen, Yun-Ching; Craig, Daniel J.; del Pozo, Angela; Foox, Jonathan; Francescatto, Margherita; Fu, Yutao; Furlanello, Cesare; Giorda, Kristina; Grist, Kira P.; Guan, Meijian; Hao, Yingyi; Happe, Scott; Hariani, Gunjan; Haseley, Nathan; Jasper, Jeff; Jurman, Giuseppe; Kreil, David Philip; Łabaj, Paweł; Lai, Kevin; Li, Jianying; Li, Quan-Zhen; Li, Yulong; Li, Zhiguang; Liu, Zhichao; López, Mario Solís; Miclaus, Kelci; Miller, Raymond; Mittal, Vinay K.; Mohiyuddin, Marghoob; Pabón-Peña, Carlos; Parsons, Barbara L.; Qiu, Fujun; Scherer, Andreas; Shi, Tieliu; Stiegelmeyer, Suzy; Suo, Chen; Tom, Nikola; Wang, Dong; Wen, Zhining; Wu, Leihong; Xiao, Wenzhong; Xu, Chang; Yu, Ying; Zhang, Jiyang; Zhang, Yifan; Zhang, Zhihong; Zheng, Yuanting; Mason, Christopher E.; Willey, James C.; Tong, Weida; Shi, Leming; Xu, Joshua
An interactive effect of batch size and composition contributes to discordant results in GWAS with the CHIAMO genotyping algorithm. 1-gen-2010 Chierici, Marco; K., Miclaus; S., Vega; Furlanello, Cesare
Artificial intelligence of imaging and clinical neurological data for predictive, preventive and personalized (P3) medicine for Parkinson Disease: The NeuroArtP3 protocol for a multi-center research study 1-gen-2024 Malaguti, Maria Chiara; Gios, Lorenzo; Giometto, Bruno; Longo, Chiara; Riello, Marianna; Ottaviani, Donatella; Pellegrini, Maria; Di Giacopo, Raffaella; Donner, Davide; Rozzanigo, Umberto; Chierici, Marco; Moroni, Monica; Jurman, Giuseppe; Bincoletto, Giorgia; Pardini, Matteo; Bacchin, Ruggero; Nobili, Flavio; Di Biasio, Francesca; Avanzino, Laura; Marchese, Roberta; Mandich, Paola; Garbarino, Sara; Pagano, Mattia; Campi, Cristina; Piana, Michele; Marenco, Manuela; Uccelli, Antonio; Osmani, Venet
Assessing sources of inconsistencies in genotypes and their effects on genome-wide association studies with HapMap samples. 1-gen-2010 H., Hong; L., Shi; Z., Su; W., Ge; W., Jones; W., Czika; K., Miclaus; C., Lambert; S., Vega; J., Zhang; B., Ning; J., Liu; B., Green; L., Xu; H., Fang; R., Perkins; S., Lin; N., Jafari; K., Park; T., Ahn; Chierici, Marco; Furlanello, Cesare; L., Zhang; R., Wolfinger; F., Goodsaid; W., Tong
Assessment of variability in GWAS with CRLMM genotyping algorithm on WTCCC Coronary Artery Disease. 1-gen-2010 L., Zhang; S., Yin; K., Miclaus; Chierici, Marco; S., Vega; C., Lambert; H., Hong; R., Wolfinger; Furlanello, Cesare; F., Goodsaid
Automatically detecting Crohn’s disease and Ulcerative Colitis from endoscopic imaging 1-gen-2022 Chierici, Marco; Puica, Nicolae; Pozzi, Matteo; Capistrano, Antonello; Dorian Donzella, Marcello; Colangelo, Antonio; Osmani, Venet; Jurman, Giuseppe
Batch Effects in the BRLMM Genotype Calling Algorithm Influence GWAS Results for the Affymetrix 500K Array. 1-gen-2010 K., Miclaus; R., Wolfinger; S., Vega; Chierici, Marco; Furlanello, Cesare; C., Lambert; H., Hong; L., Zhang; S., Yin; F., Goodsaid
Cellular and gene signatures of tumor-infiltrating dendritic cells and natural killer cells predict favorable clinical outcome of neuroblastoma 1-gen-2020 Melaiu, Ombretta; Chierici, Marco; Lucarini, Valeria; Jurman, Giuseppe; Conti, Libenzio; De Vito, Rita; Boldrini, Renata; Cifaldi, Loredana; Castellano, Aurora; Furlanello, Cesare; Barnaba, Vincenzo; Locatelli, Franco; Furci, Doriana
Clinical relevance of tumor-infiltrating immune cells in neuroblastoma 1-gen-2018 Melaiu, Ombretta; Boldrini, Renata; Chierici, Marco; Furlanello, Cesare; Fruci, Doriana
Comparison of RNA-seq and microarray-based models for clinical endpoint prediction 1-gen-2015 Zhang, Wenqian; Yu, Ying; Hertwig, Falk; Thierry Mieg, Jean; Zhang, Wenwei; Thierry Mieg, Danielle; Wang, Jian; Furlanello, Cesare; Devanarayan, Viswanath; Cheng, Jie; Deng, Youping; Hero, Barbara; Hong, Huixiao; Jia, Meiwen; Li, Li; Lin, Simon M; Nikolsky, Yuri; Oberthuer, André; Qing, Tao; Su, Zhenqiang; Volland, Ruth; Wang, Charles; Wang, May D; Ai, Junmei; Albanese, Davide; Asgharzadeh, Shahab; Avigad, Smadar; Bao, Wenjun; Bessarabova, Marina; Brilliant, Murray H; Brors, Benedikt; Chierici, Marco; Chu, Tzu Ming; Zhang, Jibin; Grundy, Richard G; He, Min Max; Hebbring, Scott; Kaufman, Howard L; Lababidi, Samir; Lancashire, Lee J; Li, Yan; Lu, Xin X; Luo, Heng; Ma, Xiwen; Ning, Baitang; Noguera, Rosa; Peifer, Martin; Phan, John H; Roels, Frederik; Rosswog, Carolina; Shao, Susan; Shen, Jie; Theissen, Jessica; Tonini, Gian Paolo; Vandesompele, Jo; Wu, Po Yen; Xiao, Wenzhong; Xu, Joshua; Xu, Weihong; Xuan, Jiekun; Yang, Yong; Ye, Zhan; Dong, Zirui; Zhang, Ke K; Yin, Ye; Zhao, Chen; Zheng, Yuanting; Wolfinger, Russell D; Shi, Tieliu; Malkas, Linda H; Berthold, Frank; Wang, Jun; Tong, Weida; Shi, Leming; Peng, Zhiyu; Fischer, Matthias
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions 1-gen-2021 Gong, Binsheng; Li, Dan; Kusko, Rebecca; Novoradovskaya, Natalia; Zhang, Yifan; Wang, Shangzi; Pabón-Peña, Carlos; Zhang, Zhihong; Lai, Kevin; Cai, Wanshi; Lococo, Jennifer S; Lader, Eric; Richmond, Todd A; Mittal, Vinay K; Liu, Liang-Chun; Johann, Donald J; Willey, James C; Bushel, Pierre R; Yu, Ying; Xu, Chang; Chen, Guangchun; Burgess, Daniel; Cawley, Simon; Giorda, Kristina; Haseley, Nathan; Qiu, Fujun; Wilkins, Katherine; Arib, Hanane; Attwooll, Claire; Babson, Kevin; Bao, Longlong; Bao, Wenjun; Lucas, Anne Bergstrom; Best, Hunter; Bhandari, Ambica; Bisgin, Halil; Blackburn, James; Blomquist, Thomas M; Boardman, Lisa; Burgher, Blake; Butler, Daniel J; Chang, Chia-Jung; Chaubey, Alka; Chen, Tao; Chierici, Marco; Chin, Christopher R; Close, Devin; Conroy, Jeffrey; Coleman, Jessica Cooley; Craig, Daniel J; Crawford, Erin; Del Pozo, Angela; Deveson, Ira W; Duncan, Daniel; Eterovic, Agda Karina; Fan, Xiaohui; Foox, Jonathan; Furlanello, Cesare; Ghosal, Abhisek; Glenn, Sean; Guan, Meijian; Haag, Christine; Hang, Xinyi; Happe, Scott; Hennigan, Brittany; Hipp, Jennifer; Hong, Huixiao; Horvath, Kyle; Hu, Jianhong; Hung, Li-Yuan; Jarosz, Mirna; Kerkhof, Jennifer; Kipp, Benjamin; Kreil, David Philip; Łabaj, Paweł; Lapunzina, Pablo; Li, Peng; Li, Quan-Zhen; Li, Weihua; Li, Zhiguang; Liang, Yu; Liu, Shaoqing; Liu, Zhichao; Ma, Charles; Marella, Narasimha; Martín-Arenas, Rubén; Megherbi, Dalila B; Meng, Qingchang; Mieczkowski, Piotr A; Morrison, Tom; Muzny, Donna; Ning, Baitang; Parsons, Barbara L; Paweletz, Cloud P; Pirooznia, Mehdi; Qu, Wubin; Raymond, Amelia; Rindler, Paul; Ringler, Rebecca; Sadikovic, Bekim; Scherer, Andreas; Schulze, Egbert; Sebra, Robert; Shaknovich, Rita; Shi, Qiang; Shi, Tieliu; Silla-Castro, Juan Carlos; Smith, Melissa; López, Mario Solís; Song, Ping; Stetson, Daniel; Strahl, Maya; Stuart, Alan; Supplee, Julianna; Szankasi, Philippe; Tan, Haowen; Tang, Lin-Ya; Tao, Yonghui; Thakkar, Shraddha; Thierry-Mieg, Danielle; Thierry-Mieg, Jean; Thodima, Venkat J; Thomas, David; Tichý, Boris; Tom, Nikola; Garcia, Elena Vallespin; Verma, Suman; Walker, Kimbley; Wang, Charles; Wang, Junwen; Wang, Yexun; Wen, Zhining; Wirta, Valtteri; Wu, Leihong; Xiao, Chunlin; Xiao, Wenzhong; Xu, Shibei; Yang, Mary; Ying, Jianming; Yip, Shun H; Zhang, Guangliang; Zhang, Sa; Zhao, Meiru; Zheng, Yuanting; Zhou, Xiaoyan; Mason, Christopher E; Mercer, Timothy; Tong, Weida; Shi, Leming; Jones, Wendell; Xu, Joshua
Cyst segmentation on kidney tubules by means of U-Net deep-learning models 1-gen-2021 Monaco, Simone; Bussola, Nicole; Butto, Sara; Sona, Diego; Apiletti, Daniele; Jurman, Giuseppe; Viola, Elisa; Chierici, Marco; Xinaris, Christodoulos; Viola, Vincenzo
Differential diagnosis of systemic lupus erythematosus and Sjögren's syndrome using machine learning and multi-omics data 1-gen-2023 Martorell Marugán, Jordi; Chierici, Marco; Jurman, Giuseppe; Alarcón-Riquelme, Marta E.; Carmona-Sáez, Pedro
Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation 1-gen-2014 Morikawa, H.; Ohkura, N.; Vandenbon, A.; Itoh, M.; Nagao-Sato, S.; Kawaji, H.; Lassmann, T.; Carninci, P.; Hayashizaki, Y.; Forrest, A. R. R.; Standley, D. M.; Date, H.; Sakaguchi, S.; Forrest, A. R. R.; Kawaji, H.; Rehli, M.; Baillie, J. K.; de Hoon, M. J. L.; Haberle, V.; Lassmann, T.; Kulakovskiy, I. V.; Lizio, M.; Itoh, M.; Andersson, R.; Mungall, C. J.; Meehan, T. F.; Schmeier, S.; Bertin, N.; Jorgensen, M.; Dimont, E.; Arner, E.; Schmidl, C.; Schaefer, U.; Medvedeva, Y. A.; Plessy, C.; Vitezic, M.; Severin, J.; Semple, C. A.; Ishizu, Y.; Francescatto, M.; Alam, I.; Albanese, D.; Altschuler, G. M.; Archer, J. A. C.; Arner, P.; Babina, M.; Baker, S.; Balwierz, P. J.; Beckhouse, A. G.; Pradhan-Bhatt, S.; Blake, J. A.; Blumenthal, A.; Bodega, B.; Bonetti, A.; Briggs, J.; Brombacher, F.; Burroughs, A. M.; Califano, A.; Cannistraci, C. V.; Carbajo, D.; Chen, Y.; Chierici, M.; Ciani, Y.; Clevers, H. C.; Dalla, E.; Davis, C. A.; Deplancke, B.; Detmar, M.; Diehl, A. D.; Dohi, T.; Drablos, F.; Edge, A. S. B.; Edinger, M.; Ekwall, K.; Endoh, M.; Enomoto, H.; Fagiolini, M.; Fairbairn, L.; Fang, H.; Farach-Carson, M. C.; Faulkner, G. J.; Favorov, A. V.; Fisher, M. E.; Frith, M. C.; Fujita, R.; Fukuda, S.; Furlanello, C.; Furuno, M.; Furusawa, J. -i.; Geijtenbeek, T. B.; Gibson, A.; Gingeras, T.; Goldowitz, D.; Gough, J.; Guhl, S.; Guler, R.; Gustincich, S.; Ha, T. J.; Hamaguchi, M.; Hara, M.; Harbers, M.; Harshbarger, J.; Hasegawa, A.; Hasegawa, Y.; Hashimoto, T.; Herlyn, M.; Hitchens, K. J.; Sui, S. J. H.; Hofmann, O. M.; Hoof, I.; Hori, F.; Huminiecki, L.; Iida, K.; Ikawa, T.; Jankovic, B. R.; Jia, H.; Joshi, A.; Jurman, G.; Kaczkowski, B.; Kai, C.; Kaida, K.; Kaiho, A.; Kajiyama, K.; Kanamori-Katayama, M.; Kasianov, A. S.; Kasukawa, T.; Katayama, S.; Kato, S.; Kawaguchi, S.; Kawamoto, H.; Kawamura, Y. I.; Kawashima, T.; Kempfle, J. S.; Kenna, T. J.; Kere, J.; Khachigian, L. M.; Kitamura, T.; Klinken, S. P.; Knox, A. J.; Kojima, M.; Kojima, S.; Kondo, N.; Koseki, H.; Koyasu, S.; Krampitz, S.; Kubosaki, A.; Kwon, A. T.; Laros, J. F. J.; Lee, W.; Lennartsson, A.; Li, K.; Lilje, B.; Lipovich, L.; Mackay-sim, A.; Manabe, R. -i.; Mar, J. C.; Marchand, B.; Mathelier, A.; Mejhert, N.; Meynert, A.; Mizuno, Y.; Morais, D. A. d. L.; Morikawa, H.; Morimoto, M.; Moro, K.; Motakis, E.; Motohashi, H.; Mummery, C. L.; Murata, M.; Nagao-Sato, S.; Nakachi, Y.; Nakahara, F.; Nakamura, T.; Nakamura, Y.; Nakazato, K.; van Nimwegen, E.; Ninomiya, N.; Nishiyori, H.; Noma, S.; Nozaki, T.; Ogishima, S.; Ohkura, N.; Ohmiya, H.; Ohno, H.; Ohshima, M.; Okada-Hatakeyama, M.; Okazaki, Y.; Orlando, V.; Ovchinnikov, D. A.; Pain, A.; Passier, R.; Patrikakis, M.; Persson, H.; Piazza, S.; Prendergast, J. G. D.; Rackham, O. J. L.; Ramilowski, J. A.; Rashid, M.; Ravasi, T.; Rizzu, P.; Roncador, M.; Roy, S.; Rye, M. B.; Saijyo, E.; Sajantila, A.; Saka, A.; Sakaguchi, S.; Sakai, M.; Sato, H.; Satoh, H.; Savvi, S.; Saxena, A.; Schneider, C.; Schultes, E. A.; Schulze-Tanzil, G. G.; Schwegmann, A.; Sengstag, T.; Sheng, G.; Shimoji, H.; Shimoni, Y.; Shin, J. W.; Simon, C.; Sugiyama, D.; Sugiyama, T.; Suzuki, M.; Swoboda, R. K.; Hoen, P. A. C. 't.; Tagami, M.; Takahashi, N.; Takai, J.; Tanaka, H.; Tatsukawa, H.; Tatum, Z.; Thompson, M.; Toyoda, H.; Toyoda, T.; Valen, E.; van de Wetering, M.; van den Berg, L. M.; Verardo, R.; Vijayan, D.; Vorontsov, I. E.; Wasserman, W. W.; Watanabe, S.; Wells, C. A.; Winteringham, L. N.; Wolvetang, E.; Wood, E. J.; Yamaguchi, Y.; Yamamoto, M.; Yoneda, M.; Yonekura, Y.; Yoshida, S.; Zabierowski, S. E.; Zhang, P. G.; Zhao, X.; Zucchelli, S.; Summers, K. M.; Suzuki, H.; Daub, C. O.; Kawai, J.; Heutink, P.; Hide, W.; Freeman, T. C.; Lenhard, B.; Bajic, V. B.; Taylor, M. S.; Makeev, V. J.; Sandelin, A.; Hume, D. A.; Carninci, P.; Hayashizaki, Y.
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network 1-gen-2021 Mathys, Grapotte; Manu, Saraswat; Chloé, Bessière; Christophe, Menichelli; Jordan A, Ramilowski; Jessica, Severin; Yoshihide, Hayashizaki; Masayoshi, Itoh; Michihira, Tagami; Mitsuyoshi, Murata; Miki, Kojima-Ishiyama; Shohei, Noma; Shuhei, Noguchi; Takeya, Kasukawa; Akira, Hasegawa; Harukazu, Suzuki; Hiromi, Nishiyori-Sueki; Martin C, Frith; Clément, Chatelain; Piero, Carninci; Michiel J L, de Hoon; Wyeth W, Wasserman; Laurent, Bréhélin; Charles-Henri, Lecellier; Abugessaisa, Imad; Aitken, Stuart; Aken, Bronwen L.; Alam, Intikhab; Alam, Tanvir; Alasiri, Rami; Alhendi, Ahmad M. N.; Alinejad-Rokny, Hamid; Alvarez, Mariano J.; Andersson, Robin; Arakawa, Takahiro; Araki, Marito; Arbel, Taly; Archer, John; Archibald, Alan L.; Arner, Erik; Arner, Peter; Asai, Kiyoshi; Ashoor, Haitham; Astrom, Gaby; Babina, Magda; Kenneth Baillie, J.; Bajic, Vladimir B.; Bajpai, Archana; Baker, Sarah; Baldarelli, Richard M.; Balic, Adam; Bansal, Mukesh; Batagov, Arsen O.; Batzoglou, Serafim; Beckhouse, Anthony G.; Beltrami, Antonio P.; Beltrami, Carlo A.; Bertin, Nicolas; Bhattacharya, Sharmodeep; Bickel, Peter J.; Blake, Judith A.; Blanchette, Mathieu; Bodega, Beatrice; Bonetti, Alessandro; Bono, Hidemasa; Bornholdt, Jette; Bttcher, Michael; Bougouffa, Salim; Boyd, Mette; Breda, Jeremie; Brombacher, Frank; Brown, James B.; Bult, Carol J.; Maxwell Burroughs, A.; Burt, Dave W.; Busch, Annika; Caglio, Giulia; Califano, Andrea; Cameron, Christopher J.; Cannistraci, Carlo V.; Carbone, Alessandra; Carlisle, Ailsa J.; Carninci, Piero; Carter, Kim W.; Cesselli, Daniela; Chang, Jen-Chien; Chen, Julie C.; Chen, Yun; Chierici, Marco; Christodoulou, John; Ciani, Yari; Clark, Emily L.; Coskun, Mehmet; Dalby, Maria; Dalla, Emiliano; Daub, Carsten O.; Davis, Carrie A.; de Hoon, Michiel J. L.; de Rie, Derek; Denisenko, Elena; Deplancke, Bart; Detmar, Michael; Deviatiiarov, Ruslan; Di Bernardo, Diego; Diehl, Alexander D.; Dieterich, Lothar C.; Dimont, Emmanuel; Djebali, Sarah; Dohi, Taeko; Dostie, Jose; Drablos, Finn; Edge, Albert S. B.; Edinger, Matthias; Ehrlund, Anna; Ekwall, Karl; Elofsson, Arne; Endoh, Mitsuhiro; Enomoto, Hideki; Enomoto, Saaya; Faghihi, Mohammad; Fagiolini, Michela; Farach-Carson, Mary C.; Faulkner, Geoffrey J.; Favorov, Alexander; Miguel Fernandes, Ana; Ferrai, Carmelo; Forrest, Alistair R. R.; Forrester, Lesley M.; Forsberg, Mattias; Fort, Alexandre; Francescatto, Margherita; Freeman, Tom C.; Frith, Martin; Fukuda, Shinji; Funayama, Manabu; Furlanello, Cesare; Furuno, Masaaki; Furusawa, Chikara; Gao, Hui; Gazova, Iveta; Gebhard, Claudia; Geier, Florian; Geijtenbeek, Teunis B. H.; Ghosh, Samik; Ghosheh, Yanal; Gingeras, Thomas R.; Gojobori, Takashi; Goldberg, Tatyana; Goldowitz, Daniel; Gough, Julian; Greco, Dario; Gruber, Andreas J.; Guhl, Sven; Guigo, Roderic; Guler, Reto; Gusev, Oleg; Gustincich, Stefano; Ha, Thomas J.; Haberle, Vanja; Hale, Paul; Hallstrom, Bjrn M.; Hamada, Michiaki; Handoko, Lusy; Hara, Mitsuko; Harbers, Matthias; Harrow, Jennifer; Harshbarger, Jayson; Hase, Takeshi; Hasegawa, Akira; Hashimoto, Kosuke; Hatano, Taku; Hattori, Nobutaka; Hayashi, Ryuhei; Hayashizaki, Yoshihide; Herlyn, Meenhard; Hettne, Kristina; Heutink, Peter; Hide, Winston; Hitchens, Kelly J.; Ho Sui, Shannon; ’t Hoen, Peter A. C.; Chau Hon, Chung; Hori, Fumi; Horie, Masafumi; Horimoto, Katsuhisa; Horton, Paul; Hou, Rui; Huang, Edward; Huang, Yi; Hugues, Richard; Hume, David; Ienasescu, Hans; Iida, Kei; Ikawa, Tomokatsu; Ikemura, Toshimichi; Ikeo, Kazuho; Inoue, Norihiko; Ishizu, Yuri; Ito, Yosuke; Itoh, Masayoshi; Ivshina, Anna V.; Jankovic, Boris R.; Jenjaroenpun, Piroon; Johnson, Rory; Jorgensen, Mette; Jorjani, Hadi; Joshi, Anagha; Jurman, Giuseppe; Kaczkowski, Bogumil; Kai, Chieko; Kaida, Kaoru; Kajiyama, Kazuhiro; Kaliyaperumal, Rajaram; Kaminuma, Eli; Kanaya, Takashi; Kaneda, Hiroshi; Kapranov, Philip; Kasianov, Artem S.; Kasukawa, Takeya; Katayama, Toshiaki; Kato, Sachi; Kawaguchi, Shuji; Kawai, Jun; Kawaji, Hideya; Kawamoto, Hiroshi; Kawamura, Yuki I.; Kawasaki, Satoshi; Kawashima, Tsugumi; Kempfle, Judith S.; Kenna, Tony J.; Kere, Juha; Khachigian, Levon; Kiryu, Hisanori; Kishima, Mami; Kitajima, Hiroyuki; Kitamura, Toshio; Kitano, Hiroaki; Klaric, Enio; Klepper, Kjetil; Peter Klinken, S.; Kloppmann, Edda; Knox, Alan J.; Kodama, Yuichi; Kogo, Yasushi; Kojima, Miki; Kojima, Soichi; Komatsu, Norio; Komiyama, Hiromitsu; Kono, Tsukasa; Koseki, Haruhiko; Koyasu, Shigeo; Kratz, Anton; Kukalev, Alexander; Kulakovskiy, Ivan; Kundaje, Anshul; Kunikata, Hiroshi; Kuo, Richard; Kuo, Tony; Kuraku, Shigehiro; Kuznetsov, Vladimir A.; Jun Kwon, Tae; Larouche, Matt; Lassmann, Timo; Law, Andy; Le-Cao, Kim-Anh; Lecellier, Charles-Henri; Lee, Weonju; Lenhard, Boris; Lennartsson, Andreas; Li, Kang; Li, Ruohan; Lilje, Berit; Lipovich, Leonard; Lizio, Marina; Lopez, Gonzalo; Magi, Shigeyuki; Mak, Gloria K.; Makeev, Vsevolod; Manabe, Riichiro; Mandai, Michiko; Mar, Jessica; Maruyama, Kazuichi; Maruyama, Taeko; Mason, Elizabeth; Mathelier, Anthony; Matsuda, Hideo; Medvedeva, Yulia A.; Meehan, Terrence F.; Mejhert, Niklas; Meynert, Alison; Mikami, Norihisa; Minoda, Akiko; Miura, Hisashi; Miyagi, Yohei; Miyawaki, Atsushi; Mizuno, Yosuke; Morikawa, Hiromasa; Morimoto, Mitsuru; Morioka, Masaki; Morishita, Soji; Moro, Kazuyo; Motakis, Efthymios; Motohashi, Hozumi; Kadir Mukarram, Abdul; Mummery, Christine L.; Mungall, Christopher J.; Murakawa, Yasuhiro; Muramatsu, Masami; Murata, Mitsuyoshi; Nagasaka, Kazunori; Nagase, Takahide; Nakachi, Yutaka; Nakahara, Fumio; Nakai, Kenta; Nakamura, Kumi; Nakamura, Yasukazu; Nakamura, Yukio; Nakazawa, Toru; Nason, Guy P.; Nepal, Chirag; Hoang Nguyen, Quan; Nielsen, Lars K.; Nishida, Kohji; Nishiguchi, Koji M.; Nishiyori, Hiromi; Nitta, Kazuhiro; Noguchi, Shuhei; Noma, Shohei; Notredame, Cedric; Ogishima, Soichi; Ohkura, Naganari; Ohno, Hiroshi; Ohshima, Mitsuhiro; Ohtsu, Takashi; Okada, Yukinori; Okada-Hatakeyama, Mariko; Okazaki, Yasushi; Oksvold, Per; Orlando, Valerio; Sion Ow, Ghim; Ozturk, Mumin; Pachkov, Mikhail; Paparountas, Triantafyllos; Parihar, Suraj P.; Park, Sung-Joon; Pascarella, Giovanni; Passier, Robert; Persson, Helena; Philippens, Ingrid H.; Piazza, Silvano; Plessy, Charles; Pombo, Ana; Ponten, Fredrik; Poulain, Stéphane; Poulsen, Thomas M.; Pradhan, Swati; Prezioso, Carolina; Pridans, Clare; Qin, Xiang-Yang; Quackenbush, John; Rackham, Owen; Ramilowski, Jordan; Ravasi, Timothy; Rehli, Michael; Rennie, Sarah; Rito, Tiago; Rizzu, Patrizia; Robert, Christelle; Roos, Marco; Rost, Burkhard; Roudnicky, Filip; Roy, Riti; Rye, Morten B.; Sachenkova, Oxana; Saetrom, Pal; Sai, Hyonmi; Saiki, Shinji; Saito, Mitsue; Saito, Akira; Sakaguchi, Shimon; Sakai, Mizuho; Sakaue, Saori; Sakaue-Sawano, Asako; Sandelin, Albin; Sano, Hiromi; Sasamoto, Yuzuru; Sato, Hiroki; Saxena, Alka; Saya, Hideyuki; Schafferhans, Andrea; Schmeier, Sebastian; Schmidl, Christian; Schmocker, Daniel; Schneider, Claudio; Schueler, Marcus; Schultes, Erik A.; Schulze-Tanzil, Gundula; Semple, Colin A.; Seno, Shigeto; Seo, Wooseok; Sese, Jun; Severin, Jessica; Sheng, Guojun; Shi, Jiantao; Shimoni, Yishai; Shin, Jay W.; Simonsanchez, Javier; Sivertsson, Asa; Sjostedt, Evelina; Soderhall, Cilla; St Laurent III, Georges; Stoiber, Marcus H.; Sugiyama, Daisuke; Summers, Kim M.; Maria Suzuki, Ana; Suzuki, Harukazu; Suzuki, Kenji; Suzuki, Mikiko; Suzuki, Naoko; Suzuki, Takahiro; Swanson, Douglas J.; Swoboda, Rolf K.; Tagami, Michihira; Taguchi, Ayumi; Takahashi, Hazuki; Takahashi, Masayo; Takamochi, Kazuya; Takeda, Satoru; Takenaka, Yoichi; Tung Tam, Kin; Tanaka, Hiroshi; Tanaka, Rica; Tanaka, Yuji; Tang, Dave; Taniuchi, Ichiro; Tanzer, Andrea; Tarui, Hiroshi; Taylor, Martin S.; Terada, Aika; Terao, Yasuhisa; Testa, Alison C.; Thomas, Mark; Thongjuea, Supat; Tomii, Kentaro; Torlai Triglia, Elena; Toyoda, Hiroo; Gwen Tsang, H.; Tsujikawa, Motokazu; Uhlén, Mathias; Valen, Eivind; van de Wetering, Marc; van Nimwegen, Erik; Velmeshev, Dmitry; Verardo, Roberto; Vitezic, Morana; Vitting-Seerup, Kristoffer; von Feilitzen, Kalle; Voolstra, Christian R.; Vorontsov, Ilya E.; Wahlestedt, Claes; Wasserman, Wyeth W.; Watanabe, Kazuhide; Watanabe, Shoko; Wells, Christine A.; Winteringham, Louise N.; Wolvetang, Ernst; Yabukami, Haruka; Yagi, Ken; Yamada, Takuji; Yamaguchi, Yoko; Yamamoto, Masayuki; Yamamoto, Yasutomo; Yamamoto, Yumiko; Yamanaka, Yasunari; Yano, Kojiro; Yasuzawa, Kayoko; Yatsuka, Yukiko; Yo, Masahiro; Yokokura, Shunji; Yoneda, Misako; Yoshida, Emiko; Yoshida, Yuki; Yoshihara, Masahito; Young, Rachel; Young, Robert S.; Yu, Nancy Y.; Yumoto, Noriko; Zabierowski, Susan E.; Zhang, Peter G.; Zucchelli, Silvia; Zwahlen, Martin
Distillation of the clinical algorithm improves prognosis by multi-task deep learning in high-risk Neuroblastoma 1-gen-2018 Maggio, Valerio; Chierici, Marco; Jurman, Giuseppe; Furlanello, Cesare